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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*02:01:01/02:01:09-B*40:02-C*03:04 | Mexico Chihuahua Tarahumara | 4.60 | 44 | 27_30_N_107_45_W |
| 2 | A*02:01:01/02:01:09-B*40:02-C*03:04-DRB1*14:02-DQB1*03:01-DPB1*02:01:02 | Mexico Chihuahua Tarahumara | 3.40 | 44 | 27_30_N_107_45_W |
| 3 | A*02:01-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02 | Colombia North Wiwa El Encanto | 0.96 | 52 | 10_10_N_73_53_W |
| 4 | A*02:01-B*40:02-C*03:04-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 5 | A*02:01-B*40:02-C*03:04-DRB1*14:02-DQB1*03:01 | USA NMDP American Indian South or Central America | 0.13 | 5,926 | 38_45_N_76_6_W |
| 6 | A*02:01-B*40:02-C*03:04-DRB1*14:02-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 0.17 | 1,376 | 38_45_N_76_6_W |
| 7 | A*02:06-B*40:02-C*03:04 | Mexico Chihuahua Tarahumara | 3.40 | 44 | 27_30_N_107_45_W |
| 8 | A*02:06-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02 | USA NMDP Alaska Native or Aleut | 0.33 | 1,376 | 38_45_N_76_6_W |
| 9 | A*02:06-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 10 | A*02:06-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*02:01 | Mexico Chiapas Lacandon Mayans | 1.38 | 218 | 16_54_N_92_5_W |
| 11 | A*02:06-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.69 | 218 | 16_54_N_92_5_W |
| 12 | A*02:06-B*40:02-C*03:04-DRB1*14:01-DQB1*05:03 | USA NMDP Alaska Native or Aleut | 0.24 | 1,376 | 38_45_N_76_6_W |
| 13 | A*02:06-B*40:02-C*03:04-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.69 | 218 | 16_54_N_92_5_W |
| 14 | A*02:06-B*40:02-C*03:04-DRB1*14:02-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 2.74 | 1,376 | 38_45_N_76_6_W |
| 15 | A*02:06-B*40:02-C*03:04-DRB1*14:02-DQB1*03:01 | USA NMDP American Indian South or Central America | 0.20 | 5,926 | 38_45_N_76_6_W |
| 16 | A*24:02:01-B*40:02-C*03:04 | Mexico Chihuahua Tarahumara | 5.10 | 44 | 27_30_N_107_45_W |
| 17 | A*24:02:01-B*40:02-C*03:04-DRB1*08:02:01-DQB1*04:02-DPB1*04:02 | Mexico Chihuahua Tarahumara | 3.40 | 44 | 27_30_N_107_45_W |
| 18 | A*24:02-B*40:02-C*03:04 | USA North American Native | 1.90 | 187 | 30_0_N_95_0_W |
| 19 | A*24:02-B*40:02-C*03:04-DRB1*04:01-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 1.24 | 1,376 | 38_45_N_76_6_W |
| 20 | A*24:02-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 21 | A*24:02-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02 | Colombia North Wiwa El Encanto | 0.96 | 52 | 10_10_N_73_53_W |
| 22 | A*24:02-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*02:01 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 23 | A*24:02-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 24 | A*24:02-B*40:02-C*03:04-DRB1*04:11-DQA1*03:03-DQB1*04:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 25 | A*24:02-B*40:02-C*03:04-DRB1*09:01-DQB1*03:03 | USA NMDP Alaska Native or Aleut | 0.55 | 1,376 | 38_45_N_76_6_W |
| 26 | A*24:02-B*40:02-C*03:04-DRB1*14:01-DQB1*05:03 | USA NMDP Alaska Native or Aleut | 1.35 | 1,376 | 38_45_N_76_6_W |
| 27 | A*24:02-B*40:02-C*03:04-DRB1*14:02-DQA1*05:03-DQB1*03:01 | Mexico Tixcacaltuyub Maya | 0.75 | 67 | 20_29_N_88_54_W |
| 28 | A*24:02-B*40:02-C*03:04-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.46 | 218 | 16_54_N_92_5_W |
| 29 | A*24:02-B*40:02-C*03:04-DRB1*14:02-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 1.60 | 1,376 | 38_45_N_76_6_W |
| 30 | A*24:02-B*40:02-C*03:04-DRB1*16:02-DQA1*05:05-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 31 | A*24:14-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.46 | 218 | 16_54_N_92_5_W |
| 32 | A*24:14-B*40:02-C*03:04-DRB1*14:02-DQA1*05:01-DQB1*03:01-DPA1*01:03-DPB1*03:01 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 33 | A*24:14-B*40:02-C*03:04-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*02:01 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 34 | A*24:14-B*40:02-C*03:04-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.92 | 218 | 16_54_N_92_5_W |
| 35 | A*24:14-B*40:02-C*03:04-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*02:01-DPB1*14:01 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 36 | A*24:14-B*40:02-C*03:04-DRB1*14:02-DQA1*05:03-DQB1*03:01-DPA1*02:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 37 | A*31:01-B*40:02-C*03:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 38 | A*31:01-B*40:02-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 39 | A*31:01-B*40:02-C*03:04-DRB1*04:04-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:01 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 40 | A*31:01-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02 | Mexico Tixcacaltuyub Maya | 0.75 | 67 | 20_29_N_88_54_W |
| 41 | A*31:01-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 12.16 | 218 | 16_54_N_92_5_W |
| 42 | A*31:01-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*105:01 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 43 | A*31:01-B*40:02-C*03:04-DRB1*04:11-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*05:01 | Mexico Chiapas Lacandon Mayans | 0.69 | 218 | 16_54_N_92_5_W |
| 44 | A*31:01-B*40:02-C*03:04-DRB1*04:11-DQA1*03:03-DQB1*04:02 | Mexico Chichen Itza Maya (prehispanic) | 2.13 | 47 | 20_40_N_88_34_W |
| 45 | A*31:01-B*40:02-C*03:04-DRB1*08:01-DQA1*04:01-DQB1*04:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 46 | A*31:01-B*40:02-C*03:04-DRB1*08:02-DQA1*04:01-DQB1*04:02 | Mexico Tixcacaltuyub Maya | 0.75 | 67 | 20_29_N_88_54_W |
| 47 | A*31:01-B*40:02-C*03:04-DRB1*13:02-DQA1*01:02-DQB1*06:04 | Mexico Tixcacaltuyub Maya | 0.75 | 67 | 20_29_N_88_54_W |
| 48 | A*68:01-B*40:02-C*03:04-DRB1*04:01-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 0.25 | 1,376 | 38_45_N_76_6_W |
| 49 | A*68:01-B*40:02-C*03:04-DRB1*04:03-DQB1*03:02 | USA NMDP Alaska Native or Aleut | 0.28 | 1,376 | 38_45_N_76_6_W |
| 50 | A*68:01-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 51 | A*68:01-B*40:02-C*03:04-DRB1*04:07-DQB1*03:02 | Colombia North Wiwa El Encanto | 0.96 | 52 | 10_10_N_73_53_W |
| 52 | A*68:01-B*40:02-C*03:04-DRB1*09:01-DQB1*03:03 | USA NMDP Alaska Native or Aleut | 0.23 | 1,376 | 38_45_N_76_6_W |
| 53 | A*68:01-B*40:02-C*03:04-DRB1*14:01-DQB1*05:03 | USA NMDP Alaska Native or Aleut | 0.25 | 1,376 | 38_45_N_76_6_W |
| 54 | A*68:01-B*40:02-C*03:04-DRB1*14:02-DQA1*05:03-DQB1*03:01 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 55 | A*68:01-B*40:02-C*03:04-DRB1*14:02-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 0.37 | 1,376 | 38_45_N_76_6_W |
| 56 | A*68:03-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 57 | A*68:05-B*40:02-C*03:04-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 58 | B*40:02-C*03:04 | Mexico Oaxaca Mixe | 3.90 | 55 | 17_5_N_96_45_W |
| 59 | B*40:02-C*03:04 | Mexico Oaxaca Mixtec | 3.00 | 103 | 17_5_N_96_45_W |
| 60 | B*40:02-C*03:04 | Mexico Oaxaca Zapotec | 2.20 | 90 | 17_5_N_96_45_W |
| 61 | B*40:02-C*03:04 | USA Alaska Yupik | 27.20 | 252 | 60_48_N_161_26_W |
| 62 | B*40:02-C*03:04 | USA North American Native | 3.70 | 187 | 30_0_N_95_0_W |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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